Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3B1O00203 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.63■□□□□ 0.25
AP3B1O00203 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.63■□□□□ 0.25
AP3B1O00203 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3B1O00203 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3B1O00203 AL603832.2-201ENST00000566195 2125 ntBASIC16.63■□□□□ 0.25
AP3B1O00203 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3B1O00203 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3B1O00203 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.62■□□□□ 0.25
AP3B1O00203 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
AP3B1O00203 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
AP3B1O00203 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
AP3B1O00203 MRPL3P1-201ENST00000400109 1033 ntBASIC16.62■□□□□ 0.25
AP3B1O00203 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.62■□□□□ 0.25
AP3B1O00203 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
AP3B1O00203 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 SLC25A6P4-201ENST00000586535 553 ntBASIC16.62■□□□□ 0.25
AP3B1O00203 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
AP3B1O00203 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.62■□□□□ 0.25
AP3B1O00203 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
AP3B1O00203 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3B1O00203 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3B1O00203 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.62■□□□□ 0.25
AP3B1O00203 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
AP3B1O00203 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
AP3B1O00203 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
AP3B1O00203 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 AC092474.2-201ENST00000424288 719 ntBASIC16.61■□□□□ 0.25
AP3B1O00203 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.61■□□□□ 0.25
AP3B1O00203 AL365330.1-201ENST00000607459 531 ntBASIC16.61■□□□□ 0.25
AP3B1O00203 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3B1O00203 AC010507.1-201ENST00000633895 436 ntBASIC16.61■□□□□ 0.25
AP3B1O00203 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3B1O00203 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3B1O00203 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
AP3B1O00203 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.61■□□□□ 0.25
AP3B1O00203 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP3B1O00203 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3B1O00203 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.61■□□□□ 0.25
AP3B1O00203 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
AP3B1O00203 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
AP3B1O00203 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3B1O00203 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3B1O00203 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
AP3B1O00203 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3B1O00203 AC140658.5-201ENST00000438532 169 ntBASIC16.6■□□□□ 0.25
AP3B1O00203 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3B1O00203 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3B1O00203 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
AP3B1O00203 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.6■□□□□ 0.25
AP3B1O00203 AC145285.3-201ENST00000564603 959 ntBASIC16.6■□□□□ 0.25
AP3B1O00203 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms