Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC074338.1-201ENST00000416825 156 ntBASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 EEF1DP4-201ENST00000446006 880 ntBASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 BCRP2-202ENST00000447763 634 ntBASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 BCRP6-201ENST00000510112 632 ntBASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 BCRP7-201ENST00000511549 544 ntBASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LOC102724428A0A0B4J2F2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 FO681548.1-201ENST00000455617 1132 ntBASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 FAM86LP-201ENST00000478302 853 ntBASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL691432.1-201ENST00000596308 1422 ntBASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC020907.1-201ENST00000616460 1350 ntBASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC005229.1-201ENST00000392885 409 ntBASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC004987.2-201ENST00000395959 1148 ntBASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 RPL7P3-201ENST00000441388 714 ntBASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC068880.1-201ENST00000507289 2297 ntBASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 AC092933.1-201ENST00000393644 945 ntBASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 BRWD1P1-201ENST00000401091 371 ntBASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms