Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 AC243591.1-201ENST00000452967 1364 ntBASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 AL590787.1-201ENST00000568856 1315 ntBASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 AL353135.1-201ENST00000606729 504 ntBASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 AP001269.4-201ENST00000609611 512 ntBASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 AC010491.1-201ENST00000563101 2797 ntBASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGB4Q9UN71 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 LINC00895-201ENST00000629028 1637 ntBASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 RBM17P3-201ENST00000417687 1192 ntBASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 HLA-J-202ENST00000469281 1241 ntBASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AC106795.1-205ENST00000512851 1056 ntBASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 TERC-201ENST00000602385 541 ntBASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AL139288.1-201ENST00000623748 933 ntBASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGB4Q9UN71 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 FOSL1P1-201ENST00000511041 816 ntBASIC16■□□□□ 0.15
PCDHGB4Q9UN71 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16■□□□□ 0.15
PCDHGB4Q9UN71 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGB4Q9UN71 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms