Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 NCF1C-201ENST00000438382 1427 ntBASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RABGEF1Q9UJ41 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 ARL4AP4-201ENST00000434170 518 ntBASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 AP001160.2-201ENST00000596071 487 ntBASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 AC134684.3-201ENST00000641758 218 ntBASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 AL031731.1-201ENST00000642131 2094 ntBASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 AC010491.1-201ENST00000563101 2797 ntBASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.93■□□□□ 0.3
RABGEF1Q9UJ41 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RABGEF1Q9UJ41 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AC006449.6-201ENST00000612330 2296 ntBASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AC002310.6-201ENST00000624451 1377 ntBASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AC004967.1-201ENST00000453589 447 ntBASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 RPS15P9-201ENST00000494093 319 ntBASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AC018845.2-201ENST00000568326 409 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms