Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
PPARGC1AQ9UBK2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PPARGC1AQ9UBK2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PPARGC1AQ9UBK2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.17■□□□□ 0.34
PPARGC1AQ9UBK2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PPARGC1AQ9UBK2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PPARGC1AQ9UBK2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PPARGC1AQ9UBK2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 RPSAP43-201ENST00000402237 625 ntBASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 GPX1P2-201ENST00000429271 606 ntBASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 FAM58CP-201ENST00000435741 640 ntBASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 AC099522.2-201ENST00000607001 744 ntBASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 AC092902.6-201ENST00000641783 218 ntBASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 AC092171.3-201ENST00000610122 2651 ntBASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.16■□□□□ 0.34
PPARGC1AQ9UBK2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 UPF3AP3-201ENST00000420996 769 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 HTR5BP-201ENST00000430851 1154 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 YBX1P5-201ENST00000509441 847 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 AC092865.5-201ENST00000545435 363 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 AC005829.1-201ENST00000570002 483 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 MIR3687-2-201ENST00000577708 61 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 MIR3687-1-201ENST00000614492 61 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 AC023511.2-201ENST00000618803 211 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 AC006449.5-201ENST00000610658 2098 ntBASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PPARGC1AQ9UBK2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms