Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNMT3BQ9UBC3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
DNMT3BQ9UBC3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
DNMT3BQ9UBC3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DNMT3BQ9UBC3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DNMT3BQ9UBC3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 GGT4P-201ENST00000623672 1708 ntBASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 AL391825.1-201ENST00000457671 1364 ntBASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 SERBP1P3-201ENST00000459980 809 ntBASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DNMT3BQ9UBC3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 AC087499.6-201ENST00000411576 835 ntBASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 AC026979.3-201ENST00000607315 403 ntBASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
DNMT3BQ9UBC3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 ARSEP1-201ENST00000420443 635 ntBASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 INE1-201ENST00000456273 945 ntBASIC17.02■□□□□ 0.32
DNMT3BQ9UBC3 AC093004.1-201ENST00000508850 424 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms