Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 AL139010.1-201ENST00000454878 894 ntBASIC18.44■□□□□ 0.54
COL20A1Q9P218 RN7SL618P-201ENST00000477850 296 ntBASIC18.44■□□□□ 0.54
COL20A1Q9P218 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 SPDYE22P-201ENST00000582158 798 ntBASIC18.44■□□□□ 0.54
COL20A1Q9P218 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 AC026979.3-201ENST00000607315 403 ntBASIC18.44■□□□□ 0.54
COL20A1Q9P218 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.44■□□□□ 0.54
COL20A1Q9P218 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.44■□□□□ 0.54
COL20A1Q9P218 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.44■□□□□ 0.54
COL20A1Q9P218 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.44■□□□□ 0.54
COL20A1Q9P218 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL20A1Q9P218 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.44■□□□□ 0.54
COL20A1Q9P218 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL20A1Q9P218 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL20A1Q9P218 ME2P1-201ENST00000426028 1970 ntBASIC18.43■□□□□ 0.54
COL20A1Q9P218 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL20A1Q9P218 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 GNAQP1-201ENST00000444815 1067 ntBASIC18.43■□□□□ 0.54
COL20A1Q9P218 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 AC135586.1-201ENST00000539323 574 ntBASIC18.43■□□□□ 0.54
COL20A1Q9P218 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 AL365330.1-201ENST00000607459 531 ntBASIC18.43■□□□□ 0.54
COL20A1Q9P218 AL033527.5-202ENST00000641632 1098 ntBASIC18.43■□□□□ 0.54
COL20A1Q9P218 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL20A1Q9P218 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.43■□□□□ 0.54
COL20A1Q9P218 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL20A1Q9P218 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL20A1Q9P218 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 CYP4F24P-201ENST00000586049 1580 ntBASIC18.42■□□□□ 0.54
COL20A1Q9P218 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 HIST3H2BA-201ENST00000436555 524 ntBASIC18.42■□□□□ 0.54
COL20A1Q9P218 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 AC104794.3-201ENST00000566840 1248 ntBASIC18.42■□□□□ 0.54
COL20A1Q9P218 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 AL662799.1-202ENST00000614205 422 ntBASIC18.42■□□□□ 0.54
COL20A1Q9P218 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL20A1Q9P218 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.42■□□□□ 0.54
COL20A1Q9P218 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL20A1Q9P218 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.41■□□□□ 0.54
COL20A1Q9P218 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL20A1Q9P218 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms