Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 AC005622.1-201ENST00000636801 1703 ntBASIC19.66■□□□□ 0.74
SALL1Q9NSC2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 U82695.1-201ENST00000635752 1889 ntBASIC19.65■□□□□ 0.74
SALL1Q9NSC2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 MIR4321-201ENST00000592276 80 ntBASIC19.65■□□□□ 0.74
SALL1Q9NSC2 AL365330.1-201ENST00000607459 531 ntBASIC19.65■□□□□ 0.74
SALL1Q9NSC2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 TNRC18P3-201ENST00000441896 2691 ntBASIC19.65■□□□□ 0.74
SALL1Q9NSC2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.65■□□□□ 0.74
SALL1Q9NSC2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.64■□□□□ 0.74
SALL1Q9NSC2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SALL1Q9NSC2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SALL1Q9NSC2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL1Q9NSC2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 AL139010.1-201ENST00000454878 894 ntBASIC19.63■□□□□ 0.73
SALL1Q9NSC2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 SERBP1P3-201ENST00000459980 809 ntBASIC19.63■□□□□ 0.73
SALL1Q9NSC2 RN7SL618P-201ENST00000477850 296 ntBASIC19.63■□□□□ 0.73
SALL1Q9NSC2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.63■□□□□ 0.73
SALL1Q9NSC2 AC005225.4-201ENST00000557330 545 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms