Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 AC099522.2-201ENST00000607001 744 ntBASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 PCGF3-213ENST00000620529 1899 ntBASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 AGGF1P2-201ENST00000426656 2106 ntBASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.13■□□□□ 0.01
SDHAF3Q9NRP4 GGT3P-204ENST00000453783 1664 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AC016027.1-202ENST00000607927 1699 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 MIR1233-2-201ENST00000408138 82 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 MIR1233-1-201ENST00000408722 82 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AC211486.1-202ENST00000416371 468 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 ALG1L5P-201ENST00000482043 771 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AC211476.1-201ENST00000503899 468 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 YBX1P5-201ENST00000509441 847 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AC023511.2-201ENST00000618803 211 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 AC079781.4-201ENST00000641908 219 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 GGT4P-201ENST00000623672 1708 ntBASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SDHAF3Q9NRP4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 FLJ38576-201ENST00000623820 2459 ntBASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 AC103702.1-201ENST00000548801 2630 ntBASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 POU5F1P6-201ENST00000466990 990 ntBASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 AL135744.1-201ENST00000565098 629 ntBASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 MIR4469-201ENST00000583919 79 ntBASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SDHAF3Q9NRP4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms