Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17■□□□□ 0.31
HPS4Q9NQG7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17■□□□□ 0.31
HPS4Q9NQG7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 HNRNPA3P5-201ENST00000455201 833 ntBASIC17■□□□□ 0.31
HPS4Q9NQG7 HLA-V-204ENST00000476601 1289 ntBASIC17■□□□□ 0.31
HPS4Q9NQG7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17■□□□□ 0.31
HPS4Q9NQG7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17■□□□□ 0.31
HPS4Q9NQG7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17■□□□□ 0.31
HPS4Q9NQG7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17■□□□□ 0.31
HPS4Q9NQG7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17■□□□□ 0.31
HPS4Q9NQG7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
HPS4Q9NQG7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HPS4Q9NQG7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
HPS4Q9NQG7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPS4Q9NQG7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 AL023806.1-201ENST00000603994 1649 ntBASIC16.99■□□□□ 0.31
HPS4Q9NQG7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 FAM220BP-201ENST00000377689 816 ntBASIC16.99■□□□□ 0.31
HPS4Q9NQG7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 SPTSSB-204ENST00000617024 1292 ntBASIC16.99■□□□□ 0.31
HPS4Q9NQG7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HPS4Q9NQG7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 AC011676.5-201ENST00000624864 2660 ntBASIC16.98■□□□□ 0.31
HPS4Q9NQG7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 AC022211.2-201ENST00000585075 2527 ntBASIC16.98■□□□□ 0.31
HPS4Q9NQG7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 AC092068.3-201ENST00000587894 2016 ntBASIC16.98■□□□□ 0.31
HPS4Q9NQG7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 GAPDHP21-201ENST00000450301 1010 ntBASIC16.98■□□□□ 0.31
HPS4Q9NQG7 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.98■□□□□ 0.31
HPS4Q9NQG7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 AC009118.2-201ENST00000613275 655 ntBASIC16.98■□□□□ 0.31
HPS4Q9NQG7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HPS4Q9NQG7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms