Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH20Q9HBT6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 KRT18P13-201ENST00000400056 1290 ntBASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 KRT18P34-201ENST00000488218 1270 ntBASIC14.41□□□□□ -0.1
CDH20Q9HBT6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 AC005829.1-201ENST00000570002 483 ntBASIC14.41□□□□□ -0.1
CDH20Q9HBT6 AC010327.4-202ENST00000591484 748 ntBASIC14.41□□□□□ -0.1
CDH20Q9HBT6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 AC020765.3-201ENST00000613051 740 ntBASIC14.41□□□□□ -0.1
CDH20Q9HBT6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.41□□□□□ -0.1
CDH20Q9HBT6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 UBALD1-205ENST00000590891 2641 ntBASIC14.41□□□□□ -0.1
CDH20Q9HBT6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 AL512652.2-201ENST00000625156 1716 ntBASIC14.41□□□□□ -0.1
CDH20Q9HBT6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDH20Q9HBT6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 HTR5BP-201ENST00000430851 1154 ntBASIC14.4□□□□□ -0.1
CDH20Q9HBT6 MKNK2P1-201ENST00000437526 628 ntBASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ACTG1P14-201ENST00000446382 1122 ntBASIC14.4□□□□□ -0.1
CDH20Q9HBT6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 FLJ38576-201ENST00000623820 2459 ntBASIC14.4□□□□□ -0.1
CDH20Q9HBT6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDH20Q9HBT6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms