Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRF2Q9HAW0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 FDX1P1-201ENST00000449115 551 ntBASIC15.72■□□□□ 0.11
BRF2Q9HAW0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 AL161645.1-201ENST00000622716 1255 ntBASIC15.72■□□□□ 0.11
BRF2Q9HAW0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 ZNF259P1-201ENST00000407656 1365 ntBASIC15.72■□□□□ 0.11
BRF2Q9HAW0 AC007950.2-201ENST00000615045 2347 ntBASIC15.72■□□□□ 0.11
BRF2Q9HAW0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.72■□□□□ 0.11
BRF2Q9HAW0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.71■□□□□ 0.11
BRF2Q9HAW0 AL591424.1-201ENST00000442569 1213 ntBASIC15.71■□□□□ 0.11
BRF2Q9HAW0 KRT18P2-201ENST00000447938 1258 ntBASIC15.71■□□□□ 0.11
BRF2Q9HAW0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 PDPK2P-202ENST00000562415 1191 ntBASIC15.71■□□□□ 0.11
BRF2Q9HAW0 AC018845.2-201ENST00000568326 409 ntBASIC15.71■□□□□ 0.11
BRF2Q9HAW0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 BX640515.1-201ENST00000617215 977 ntBASIC15.71■□□□□ 0.11
BRF2Q9HAW0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
BRF2Q9HAW0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BRF2Q9HAW0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.71■□□□□ 0.1
BRF2Q9HAW0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
BRF2Q9HAW0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BRF2Q9HAW0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
BRF2Q9HAW0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.71■□□□□ 0.1
BRF2Q9HAW0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRF2Q9HAW0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms