Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 AC112504.1-201ENST00000623415 1841 ntBASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCSER1Q9C0I3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 FOXO1B-201ENST00000504678 1527 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 MKNK2P1-201ENST00000437526 628 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 AC245100.5-201ENST00000452108 331 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 AC105233.2-201ENST00000523697 349 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 AF228730.5-201ENST00000530288 346 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 AC243562.1-201ENST00000560672 389 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 MIR4321-201ENST00000592276 80 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 MTDHP5-201ENST00000598980 586 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 AC008267.7-201ENST00000624570 1194 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 AC008677.1-201ENST00000519230 1561 ntBASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCSER1Q9C0I3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCSER1Q9C0I3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCSER1Q9C0I3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCSER1Q9C0I3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCSER1Q9C0I3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCSER1Q9C0I3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CCSER1Q9C0I3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCSER1Q9C0I3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 YBX2P1-201ENST00000394192 760 ntBASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 ACTG1P14-201ENST00000446382 1122 ntBASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 LINC02447-202ENST00000501888 2146 ntBASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCSER1Q9C0I3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 AC007950.2-201ENST00000615045 2347 ntBASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCSER1Q9C0I3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms