Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 AP001005.1-201ENST00000571755 1248 ntBASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 LINC00554-201ENST00000564841 3011 ntBASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
UPF3BQ9BZI7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.64■□□□□ 0.74
UPF3BQ9BZI7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
UPF3BQ9BZI7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.64■□□□□ 0.74
UPF3BQ9BZI7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPF3BQ9BZI7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 VN2R19P-201ENST00000442399 1052 ntBASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 AL513480.1-201ENST00000451731 511 ntBASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 POU5F1P6-201ENST00000466990 990 ntBASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 IGHV3-22-201ENST00000520721 359 ntBASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPF3BQ9BZI7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 AC105917.1-201ENST00000506637 2539 ntBASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 IL9RP2-201ENST00000423948 1312 ntBASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPF3BQ9BZI7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms