Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AL021331.1-201ENST00000402817 582 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AL031577.2-201ENST00000404133 280 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AP001625.3-201ENST00000416179 449 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 GTF3C2-AS1-201ENST00000416453 863 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AP000233.2-202ENST00000418942 684 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 VN1R35P-201ENST00000428102 693 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AL589880.1-201ENST00000448271 287 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 DNAJC19P1-201ENST00000455312 319 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 HNRNPA1P26-201ENST00000457695 1092 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC010267.1-201ENST00000508636 553 ntTSL 4 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC093824.1-201ENST00000508796 343 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 RNU6-789P-201ENST00000517105 102 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 BTF3P1-201ENST00000522014 495 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC023078.3-201ENST00000527463 958 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC090971.3-201ENST00000557871 1041 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC122108.1-201ENST00000558419 424 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC015917.1-201ENST00000579654 510 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 THRA1/BTR-202ENST00000581362 902 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC104564.3-201ENST00000582367 638 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 POLR3GP2-201ENST00000588366 668 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AL669831.4-202ENST00000590817 238 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC098614.4-201ENST00000607601 462 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AL031848.2-201ENST00000607670 837 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AL078596.1-201ENST00000624856 447 ntBASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-2Q9BYR7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 U3.4-201ENST00000363352 213 ntBASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 RN7SKP28-201ENST00000364770 305 ntBASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 WFDC12-201ENST00000372785 775 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 Y_RNA.529-201ENST00000384586 119 ntBASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 KRTAP4-7-201ENST00000391417 992 ntAPPRIS P2 BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 HMGB3P19-201ENST00000403971 560 ntBASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 AC007390.1-201ENST00000415722 356 ntBASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 GPM6BP2-201ENST00000432046 144 ntBASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 Z85994.2-201ENST00000434327 452 ntBASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 GPM6BP1-201ENST00000446387 144 ntBASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 C1DP3-201ENST00000455013 423 ntBASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-2Q9BYR7 CREM-220ENST00000463314 964 ntTSL 2 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms