Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 GPAA1P2-202ENST00000606848 1787 ntBASIC14.56□□□□□ -0.08
SPENQ96T58 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SPENQ96T58 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SPENQ96T58 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.56□□□□□ -0.08
SPENQ96T58 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 RPL7P3-201ENST00000441388 714 ntBASIC14.56□□□□□ -0.08
SPENQ96T58 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SPENQ96T58 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.56□□□□□ -0.08
SPENQ96T58 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.56□□□□□ -0.08
SPENQ96T58 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.56□□□□□ -0.08
SPENQ96T58 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.56□□□□□ -0.08
SPENQ96T58 DUX4L45-201ENST00000566406 1057 ntBASIC14.56□□□□□ -0.08
SPENQ96T58 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.56□□□□□ -0.08
SPENQ96T58 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SPENQ96T58 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPENQ96T58 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.56□□□□□ -0.08
SPENQ96T58 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.55□□□□□ -0.08
SPENQ96T58 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.55□□□□□ -0.08
SPENQ96T58 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 AC005702.4-201ENST00000618393 416 ntBASIC14.55□□□□□ -0.08
SPENQ96T58 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.55□□□□□ -0.08
SPENQ96T58 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.55□□□□□ -0.08
SPENQ96T58 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.55□□□□□ -0.08
SPENQ96T58 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 IGHJ2P-201ENST00000454480 60 ntBASIC14.55□□□□□ -0.08
SPENQ96T58 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.55□□□□□ -0.08
SPENQ96T58 SLC25A47P1-201ENST00000531577 414 ntBASIC14.55□□□□□ -0.08
SPENQ96T58 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.55□□□□□ -0.08
SPENQ96T58 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.55□□□□□ -0.08
SPENQ96T58 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SPENQ96T58 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
SPENQ96T58 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.54□□□□□ -0.08
SPENQ96T58 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.54□□□□□ -0.08
SPENQ96T58 LINC01115-203ENST00000606068 577 ntBASIC14.54□□□□□ -0.08
SPENQ96T58 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.54□□□□□ -0.08
SPENQ96T58 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.54□□□□□ -0.08
SPENQ96T58 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPENQ96T58 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.54□□□□□ -0.08
SPENQ96T58 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.54□□□□□ -0.08
SPENQ96T58 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.54□□□□□ -0.08
SPENQ96T58 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.54□□□□□ -0.08
SPENQ96T58 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.54□□□□□ -0.08
SPENQ96T58 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.54□□□□□ -0.08
SPENQ96T58 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms