Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 HLA-J-203ENST00000494367 1087 ntBASIC16.93■□□□□ 0.3
RPRD1AQ96P16 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.93■□□□□ 0.3
RPRD1AQ96P16 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 GPS2P2-201ENST00000430745 888 ntBASIC16.92■□□□□ 0.3
RPRD1AQ96P16 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 AC109322.1-201ENST00000524499 1264 ntBASIC16.92■□□□□ 0.3
RPRD1AQ96P16 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 SPTSSB-204ENST00000617024 1292 ntBASIC16.92■□□□□ 0.3
RPRD1AQ96P16 AC093028.1-201ENST00000622998 982 ntBASIC16.92■□□□□ 0.3
RPRD1AQ96P16 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 AC005622.1-201ENST00000636801 1703 ntBASIC16.92■□□□□ 0.3
RPRD1AQ96P16 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.92■□□□□ 0.3
RPRD1AQ96P16 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 FOXO1B-201ENST00000504678 1527 ntBASIC16.91■□□□□ 0.3
RPRD1AQ96P16 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.91■□□□□ 0.3
RPRD1AQ96P16 PMS2P2-201ENST00000425039 1128 ntBASIC16.91■□□□□ 0.3
RPRD1AQ96P16 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPRD1AQ96P16 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms