Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX27Q96L92 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX27Q96L92 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SNX27Q96L92 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX27Q96L92 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX27Q96L92 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX27Q96L92 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX27Q96L92 AC097493.3-201ENST00000509725 367 ntBASIC17.67■□□□□ 0.42
SNX27Q96L92 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX27Q96L92 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX27Q96L92 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX27Q96L92 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 AC027307.3-201ENST00000594262 1100 ntBASIC17.67■□□□□ 0.42
SNX27Q96L92 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX27Q96L92 SPDYE12P-201ENST00000618416 771 ntBASIC17.67■□□□□ 0.42
SNX27Q96L92 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX27Q96L92 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX27Q96L92 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SNX27Q96L92 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SNX27Q96L92 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX27Q96L92 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX27Q96L92 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX27Q96L92 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX27Q96L92 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SNX27Q96L92 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX27Q96L92 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 NME2P1-201ENST00000426182 414 ntBASIC17.66■□□□□ 0.42
SNX27Q96L92 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.66■□□□□ 0.42
SNX27Q96L92 TSPY16P-201ENST00000449843 468 ntBASIC17.66■□□□□ 0.42
SNX27Q96L92 POU5F1P6-201ENST00000466990 990 ntBASIC17.66■□□□□ 0.42
SNX27Q96L92 IGHV3-42-201ENST00000520410 361 ntBASIC17.66■□□□□ 0.42
SNX27Q96L92 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.66■□□□□ 0.42
SNX27Q96L92 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.66■□□□□ 0.42
SNX27Q96L92 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.66■□□□□ 0.42
SNX27Q96L92 AC024267.1-201ENST00000582320 895 ntBASIC17.66■□□□□ 0.42
SNX27Q96L92 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX27Q96L92 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.66■□□□□ 0.42
SNX27Q96L92 AL390754.1-201ENST00000619088 582 ntBASIC17.66■□□□□ 0.42
SNX27Q96L92 AC073592.8-201ENST00000624126 511 ntBASIC17.66■□□□□ 0.42
SNX27Q96L92 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SNX27Q96L92 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX27Q96L92 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX27Q96L92 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX27Q96L92 AL035456.1-201ENST00000456064 1369 ntBASIC17.66■□□□□ 0.42
SNX27Q96L92 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX27Q96L92 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX27Q96L92 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX27Q96L92 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX27Q96L92 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX27Q96L92 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.65■□□□□ 0.42
SNX27Q96L92 HAUS4P1-201ENST00000406739 1145 ntBASIC17.65■□□□□ 0.42
SNX27Q96L92 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX27Q96L92 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX27Q96L92 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX27Q96L92 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms