Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.64■□□□□ 0.25
CHFRQ96EP1 SRD5A3P1-201ENST00000603021 949 ntBASIC16.64■□□□□ 0.25
CHFRQ96EP1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.64■□□□□ 0.25
CHFRQ96EP1 AC004461.2-201ENST00000629517 803 ntBASIC16.64■□□□□ 0.25
CHFRQ96EP1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHFRQ96EP1 SLC7A15P-201ENST00000424028 1363 ntBASIC16.64■□□□□ 0.25
CHFRQ96EP1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 ATP5G2P4-201ENST00000442175 420 ntBASIC16.63■□□□□ 0.25
CHFRQ96EP1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 AL391825.1-201ENST00000457671 1364 ntBASIC16.63■□□□□ 0.25
CHFRQ96EP1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CHFRQ96EP1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHFRQ96EP1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 SERBP1P3-201ENST00000459980 809 ntBASIC16.62■□□□□ 0.25
CHFRQ96EP1 AC093004.1-201ENST00000508850 424 ntBASIC16.62■□□□□ 0.25
CHFRQ96EP1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 AC023310.3-201ENST00000557027 670 ntBASIC16.62■□□□□ 0.25
CHFRQ96EP1 AC100756.1-201ENST00000562736 682 ntBASIC16.62■□□□□ 0.25
CHFRQ96EP1 AC138749.3-201ENST00000567691 622 ntBASIC16.62■□□□□ 0.25
CHFRQ96EP1 AC116165.1-201ENST00000611806 668 ntBASIC16.62■□□□□ 0.25
CHFRQ96EP1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.62■□□□□ 0.25
CHFRQ96EP1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHFRQ96EP1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHFRQ96EP1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms