Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.26□□□□□ -0.45
RNF183Q96D59 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.26□□□□□ -0.45
RNF183Q96D59 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.26□□□□□ -0.45
RNF183Q96D59 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 AC004835.2-201ENST00000603762 682 ntBASIC12.26□□□□□ -0.45
RNF183Q96D59 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 KRT18P28-201ENST00000453838 1332 ntBASIC12.26□□□□□ -0.45
RNF183Q96D59 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.26□□□□□ -0.45
RNF183Q96D59 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RNF183Q96D59 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF183Q96D59 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
RNF183Q96D59 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF183Q96D59 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.25□□□□□ -0.45
RNF183Q96D59 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
RNF183Q96D59 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.25□□□□□ -0.45
RNF183Q96D59 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.25□□□□□ -0.45
RNF183Q96D59 HMGA1P7-201ENST00000406908 502 ntBASIC12.25□□□□□ -0.45
RNF183Q96D59 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 AL671277.1-201ENST00000429656 993 ntBASIC12.25□□□□□ -0.45
RNF183Q96D59 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.25□□□□□ -0.45
RNF183Q96D59 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.25□□□□□ -0.45
RNF183Q96D59 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.25□□□□□ -0.45
RNF183Q96D59 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.25□□□□□ -0.45
RNF183Q96D59 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 AL161645.1-201ENST00000622716 1255 ntBASIC12.25□□□□□ -0.45
RNF183Q96D59 AL513210.1-201ENST00000629608 234 ntBASIC12.25□□□□□ -0.45
RNF183Q96D59 AC105339.1-204ENST00000636249 355 ntBASIC12.25□□□□□ -0.45
RNF183Q96D59 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 FRMD8P1-201ENST00000440433 1524 ntBASIC12.25□□□□□ -0.45
RNF183Q96D59 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RNF183Q96D59 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RNF183Q96D59 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.25□□□□□ -0.45
RNF183Q96D59 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RNF183Q96D59 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
RNF183Q96D59 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF183Q96D59 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF183Q96D59 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RNF183Q96D59 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms