Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 GGT4P-201ENST00000623672 1708 ntBASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 GGT3P-204ENST00000453783 1664 ntBASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 AC079776.2-201ENST00000641154 1609 ntBASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 AC006449.6-201ENST00000612330 2296 ntBASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RAB40AQ8WXH6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 AL590627.1-203ENST00000421194 1026 ntBASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 RNA5SP419-201ENST00000515908 135 ntBASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 BX640515.1-201ENST00000617215 977 ntBASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 AC073592.5-201ENST00000624854 528 ntBASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 AC006058.4-201ENST00000624016 1670 ntBASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40AQ8WXH6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms