Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC092552.1-201ENST00000547243 906 ntBASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 AC008735.3-201ENST00000596646 500 ntBASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 CDC14C-201ENST00000428251 1719 ntBASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 AC005052.1-201ENST00000625181 2492 ntBASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 AC005332.8-201ENST00000622750 2735 ntBASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 CLK3P2-201ENST00000427566 1453 ntBASIC25.11■■□□□ 1.61
CASKIN1Q8WXD9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 AC036164.1-201ENST00000570544 333 ntBASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
CASKIN1Q8WXD9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 KRT18P64-201ENST00000434946 1219 ntBASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 NME4-207ENST00000450036 985 ntTSL 3 BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 AC007389.4-201ENST00000454674 793 ntBASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 TIMM17BP1-201ENST00000545713 516 ntBASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC25.09■■□□□ 1.61
CASKIN1Q8WXD9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms