Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CT55Q8WUE5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.22■□□□□ 0.03
CT55Q8WUE5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CT55Q8WUE5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CT55Q8WUE5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CT55Q8WUE5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CT55Q8WUE5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 AP006294.1-201ENST00000415407 339 ntBASIC15.21■□□□□ 0.03
CT55Q8WUE5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 WASH4P-201ENST00000564273 1246 ntBASIC15.21■□□□□ 0.03
CT55Q8WUE5 SRD5A3P1-201ENST00000603021 949 ntBASIC15.21■□□□□ 0.03
CT55Q8WUE5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 AC007431.3-201ENST00000623221 587 ntBASIC15.21■□□□□ 0.03
CT55Q8WUE5 AC004461.2-201ENST00000629517 803 ntBASIC15.21■□□□□ 0.03
CT55Q8WUE5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CT55Q8WUE5 AL645608.8-201ENST00000606034 2086 ntBASIC15.21■□□□□ 0.03
CT55Q8WUE5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CT55Q8WUE5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.21■□□□□ 0.02
CT55Q8WUE5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CT55Q8WUE5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CT55Q8WUE5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CT55Q8WUE5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 GGT3P-204ENST00000453783 1664 ntBASIC15.2■□□□□ 0.02
CT55Q8WUE5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 SLC7A15P-201ENST00000424028 1363 ntBASIC15.2■□□□□ 0.02
CT55Q8WUE5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.2■□□□□ 0.02
CT55Q8WUE5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 LINC01144-201ENST00000626198 1710 ntBASIC15.2■□□□□ 0.02
CT55Q8WUE5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CT55Q8WUE5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CT55Q8WUE5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms