Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 FOSL1P1-201ENST00000511041 816 ntBASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 AL160237.2-201ENST00000556165 472 ntBASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.14■□□□□ 0.33
ACTRT1Q8TDG2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 AC136621.1-201ENST00000624017 2304 ntBASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 TMBIM7P-203ENST00000641617 1718 ntBASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTRT1Q8TDG2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 RPS15P9-201ENST00000494093 319 ntBASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 AC006557.2-201ENST00000592985 1240 ntBASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 AC025062.2-201ENST00000605477 670 ntBASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 AC006486.2-201ENST00000624246 2199 ntBASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.12■□□□□ 0.33
ACTRT1Q8TDG2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTRT1Q8TDG2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTRT1Q8TDG2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTRT1Q8TDG2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTRT1Q8TDG2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTRT1Q8TDG2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms