Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AL139400.1-201ENST00000366220 510 ntBASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 KRT18P32-201ENST00000424695 1287 ntBASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AC046158.3-201ENST00000624947 2558 ntBASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AC063926.3-201ENST00000624734 5658 ntBASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 UXT-AS1-201ENST00000590504 1525 ntBASIC14.82□□□□□ -0.04
FNDC9Q8TBE3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 PCDHB19P-201ENST00000570871 2371 ntBASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 AC008894.3-201ENST00000624324 3103 ntBASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 LINC01225-203ENST00000563550 1244 ntBASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 AC027307.2-201ENST00000591252 911 ntBASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 AC093028.1-201ENST00000622998 982 ntBASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 AC009093.7-201ENST00000623853 1223 ntBASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms