Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC079140.1-201ENST00000508039 487 ntBASIC17.54■□□□□ 0.4
LMO3Q8TAP4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 SPTSSB-204ENST00000617024 1292 ntBASIC17.54■□□□□ 0.4
LMO3Q8TAP4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 AC084121.4-201ENST00000641598 221 ntBASIC17.54■□□□□ 0.4
LMO3Q8TAP4 AF228730.8-201ENST00000642140 221 ntBASIC17.54■□□□□ 0.4
LMO3Q8TAP4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.54■□□□□ 0.4
LMO3Q8TAP4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 YBX1P5-201ENST00000509441 847 ntBASIC17.53■□□□□ 0.4
LMO3Q8TAP4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 AC061975.2-201ENST00000581722 295 ntBASIC17.53■□□□□ 0.4
LMO3Q8TAP4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 CICP6-201ENST00000457191 2729 ntBASIC17.53■□□□□ 0.4
LMO3Q8TAP4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMO3Q8TAP4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 RN7SL589P-201ENST00000481268 310 ntBASIC17.52■□□□□ 0.4
LMO3Q8TAP4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 AP000842.3-202ENST00000569238 1080 ntBASIC17.52■□□□□ 0.4
LMO3Q8TAP4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.52■□□□□ 0.4
LMO3Q8TAP4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 ELL2P1-201ENST00000413990 1906 ntBASIC17.52■□□□□ 0.4
LMO3Q8TAP4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LMO3Q8TAP4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LMO3Q8TAP4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms