Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 TSPY22P-201ENST00000427496 604 ntBASIC14.28□□□□□ -0.12
BEST4Q8NFU0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 AC005363.2-201ENST00000618631 242 ntBASIC14.28□□□□□ -0.12
BEST4Q8NFU0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 LINC00895-201ENST00000629028 1637 ntBASIC14.28□□□□□ -0.12
BEST4Q8NFU0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.27□□□□□ -0.12
BEST4Q8NFU0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.27□□□□□ -0.12
BEST4Q8NFU0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 AC092647.4-201ENST00000457211 535 ntBASIC14.27□□□□□ -0.13
BEST4Q8NFU0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 AC009533.2-201ENST00000543664 586 ntBASIC14.27□□□□□ -0.13
BEST4Q8NFU0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 AC090616.6-201ENST00000582640 721 ntBASIC14.27□□□□□ -0.13
BEST4Q8NFU0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.27□□□□□ -0.13
BEST4Q8NFU0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.26□□□□□ -0.13
BEST4Q8NFU0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 AL845331.1-201ENST00000424978 1190 ntBASIC14.26□□□□□ -0.13
BEST4Q8NFU0 SPDYE13P-201ENST00000445314 798 ntBASIC14.26□□□□□ -0.13
BEST4Q8NFU0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BEST4Q8NFU0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms