Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 AL121949.1-201ENST00000402043 968 ntBASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 PMS2P2-201ENST00000425039 1128 ntBASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 PGAM5P1-201ENST00000518923 814 ntBASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 AL355385.1-201ENST00000606123 409 ntBASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 MKKS-203ENST00000609375 882 ntTSL 2 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 AC004777.1-201ENST00000624317 287 ntBASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EFCAB3Q8N7B9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 AC132938.5-201ENST00000624980 1813 ntBASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 UPF3AP3-201ENST00000420996 769 ntBASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 RPS8P6-201ENST00000426177 609 ntBASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 HMGN1P19-201ENST00000436976 333 ntBASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 AL591424.1-201ENST00000442569 1213 ntBASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 ABCD1P5-201ENST00000445663 754 ntBASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 AC140113.2-201ENST00000604370 208 ntBASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
EFCAB3Q8N7B9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 HLA-A-202ENST00000376806 1854 ntBASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 AC104109.2-201ENST00000602919 1418 ntBASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
EFCAB3Q8N7B9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.51■□□□□ 0.23
EFCAB3Q8N7B9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms