Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 PCDH8P1-201ENST00000428983 2773 ntBASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM48Q8IWZ4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 AL645939.2-201ENST00000427340 991 ntBASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 AC027796.2-201ENST00000575326 344 ntBASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 AC106028.4-201ENST00000614509 607 ntBASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 AC008267.7-201ENST00000624570 1194 ntBASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM48Q8IWZ4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 AC093520.2-201ENST00000561830 333 ntBASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM48Q8IWZ4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms