Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC6Q8IVU3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
HERC6Q8IVU3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.71■□□□□ 0.42
HERC6Q8IVU3 AC116353.5-201ENST00000638148 1699 ntBASIC17.71■□□□□ 0.42
HERC6Q8IVU3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.71■□□□□ 0.42
HERC6Q8IVU3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 PCDHA12-202ENST00000613593 2588 ntBASIC17.7■□□□□ 0.42
HERC6Q8IVU3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.7■□□□□ 0.42
HERC6Q8IVU3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 AC007389.4-201ENST00000454674 793 ntBASIC17.7■□□□□ 0.42
HERC6Q8IVU3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 AC084346.2-201ENST00000607097 949 ntBASIC17.7■□□□□ 0.42
HERC6Q8IVU3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 MIR6775-201ENST00000617557 69 ntBASIC17.7■□□□□ 0.42
HERC6Q8IVU3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 AL671710.1-201ENST00000610245 2349 ntBASIC17.7■□□□□ 0.42
HERC6Q8IVU3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.7■□□□□ 0.42
HERC6Q8IVU3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.69■□□□□ 0.42
HERC6Q8IVU3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 FAM86MP-201ENST00000340703 885 ntBASIC17.69■□□□□ 0.42
HERC6Q8IVU3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 AC098850.1-201ENST00000419919 790 ntBASIC17.69■□□□□ 0.42
HERC6Q8IVU3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC6Q8IVU3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms