Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.23■□□□□ 0.03
VRK2Q86Y07 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 HCG4B-203ENST00000450128 991 ntBASIC15.23■□□□□ 0.03
VRK2Q86Y07 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 AL645728.2-201ENST00000641974 660 ntBASIC15.23■□□□□ 0.03
VRK2Q86Y07 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 AC021097.1-201ENST00000607902 574 ntBASIC15.22■□□□□ 0.03
VRK2Q86Y07 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 AC010507.1-201ENST00000633895 436 ntBASIC15.22■□□□□ 0.03
VRK2Q86Y07 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.22■□□□□ 0.03
VRK2Q86Y07 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VRK2Q86Y07 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 HLA-A-201ENST00000376802 1334 ntBASIC15.21■□□□□ 0.03
VRK2Q86Y07 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms