Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 AC105129.2-201ENST00000559536 390 ntBASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 DUX4L45-201ENST00000566406 1057 ntBASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 KRT43P-201ENST00000434019 910 ntBASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 AC104457.1-201ENST00000401024 814 ntBASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 MEP1AP4-201ENST00000423244 1087 ntBASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13BQ7Z7G8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 GPAA1P2-202ENST00000606848 1787 ntBASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 RRP7BP-205ENST00000566851 833 ntBASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
VPS13BQ7Z7G8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 RPS2P36-201ENST00000456516 831 ntBASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 KRT90P-201ENST00000549264 1064 ntBASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 AC091046.1-201ENST00000331871 207 ntBASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 AC068587.3-201ENST00000526613 355 ntBASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 AC079328.1-201ENST00000560358 952 ntBASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC9.96□□□□□ -0.82
VPS13BQ7Z7G8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms