Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 SOCS2P1-201ENST00000417727 557 ntBASIC16.63■□□□□ 0.25
DENND4AQ7Z401 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 FO681548.1-201ENST00000455617 1132 ntBASIC16.63■□□□□ 0.25
DENND4AQ7Z401 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 PTP4A1P2-201ENST00000546033 454 ntBASIC16.63■□□□□ 0.25
DENND4AQ7Z401 KRT90P-201ENST00000549264 1064 ntBASIC16.63■□□□□ 0.25
DENND4AQ7Z401 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 GGT3P-204ENST00000453783 1664 ntBASIC16.63■□□□□ 0.25
DENND4AQ7Z401 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
DENND4AQ7Z401 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 AL603756.1-201ENST00000606511 2163 ntBASIC16.62■□□□□ 0.25
DENND4AQ7Z401 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 AL355864.2-201ENST00000447420 863 ntBASIC16.62■□□□□ 0.25
DENND4AQ7Z401 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 AC133539.2-201ENST00000604757 467 ntBASIC16.62■□□□□ 0.25
DENND4AQ7Z401 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
DENND4AQ7Z401 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AC106760.1-201ENST00000508690 800 ntBASIC16.61■□□□□ 0.25
DENND4AQ7Z401 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 SLC25A47P1-201ENST00000531577 414 ntBASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AL139099.5-201ENST00000635274 300 ntBASIC16.61■□□□□ 0.25
DENND4AQ7Z401 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AL391256.1-201ENST00000443260 1855 ntBASIC16.61■□□□□ 0.25
DENND4AQ7Z401 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AP001094.4-201ENST00000579008 2176 ntBASIC16.61■□□□□ 0.25
DENND4AQ7Z401 PCDHB18P-201ENST00000524813 2368 ntBASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AC120045.2-201ENST00000567334 178 ntBASIC16.61■□□□□ 0.25
DENND4AQ7Z401 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.61■□□□□ 0.25
DENND4AQ7Z401 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DENND4AQ7Z401 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms