Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 AC003669.1-201ENST00000334569 611 ntBASIC15.26■□□□□ 0.03
TUBA1AQ71U36 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 MRPL3P1-201ENST00000400109 1033 ntBASIC15.26■□□□□ 0.03
TUBA1AQ71U36 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 AC026396.1-201ENST00000419388 421 ntBASIC15.26■□□□□ 0.03
TUBA1AQ71U36 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 SCARNA2-201ENST00000458748 420 ntBASIC15.26■□□□□ 0.03
TUBA1AQ71U36 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 AC021087.4-201ENST00000563761 564 ntBASIC15.26■□□□□ 0.03
TUBA1AQ71U36 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TUBA1AQ71U36 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 AL603832.2-201ENST00000566195 2125 ntBASIC15.25■□□□□ 0.03
TUBA1AQ71U36 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 AL020989.1-201ENST00000422979 469 ntBASIC15.25■□□□□ 0.03
TUBA1AQ71U36 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 AC073648.2-201ENST00000510116 352 ntBASIC15.25■□□□□ 0.03
TUBA1AQ71U36 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 AL139288.1-201ENST00000623748 933 ntBASIC15.25■□□□□ 0.03
TUBA1AQ71U36 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms