Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 DDX43P3-201ENST00000441064 443 ntBASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 AC092183.1-201ENST00000469884 875 ntBASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 AL691403.2-201ENST00000618460 490 ntBASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
FOXR1Q6PIV2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 FAM220CP-201ENST00000395253 831 ntBASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 AC021087.4-201ENST00000563761 564 ntBASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXR1Q6PIV2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FOXR1Q6PIV2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.21■□□□□ 0.34
FOXR1Q6PIV2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FOXR1Q6PIV2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FOXR1Q6PIV2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.21■□□□□ 0.34
FOXR1Q6PIV2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
FOXR1Q6PIV2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.34
FOXR1Q6PIV2 AL596087.1-201ENST00000400979 1969 ntBASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXR1Q6PIV2 AC006538.1-201ENST00000567905 1585 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms