Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 AC133539.2-201ENST00000604757 467 ntBASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 LINC01115-203ENST00000606068 577 ntBASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 KLF2P4-201ENST00000451959 1225 ntBASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 CTBP2P5-201ENST00000454986 1264 ntBASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 AL158212.4-201ENST00000624062 1286 ntBASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.48■□□□□ 0.39
CNKSR3Q6P9H4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 PDIA3P1-201ENST00000471856 1510 ntBASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 AL133338.1-201ENST00000565695 1517 ntBASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 LINC01144-201ENST00000626198 1710 ntBASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 ACTG1P3-201ENST00000431775 1114 ntBASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 MIR5189-201ENST00000577370 114 ntBASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 CU634019.7-201ENST00000624153 1185 ntBASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 FP236241.2-201ENST00000624906 1185 ntBASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.47■□□□□ 0.39
CNKSR3Q6P9H4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.46■□□□□ 0.39
CNKSR3Q6P9H4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms