Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC62Q6P9F0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 ZNF890P-202ENST00000530367 1156 ntBASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AC025048.6-201ENST00000634326 1161 ntBASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AC004840.1-201ENST00000636359 365 ntBASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 AC006538.1-201ENST00000567905 1585 ntBASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC62Q6P9F0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 AC099398.1-201ENST00000567919 2776 ntBASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 AC024267.1-201ENST00000582320 895 ntBASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC62Q6P9F0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC62Q6P9F0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC62Q6P9F0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
CCDC62Q6P9F0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC62Q6P9F0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms