Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 TMEM14DP-201ENST00000422205 345 ntBASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 AC074044.1-201ENST00000609673 707 ntBASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 PCGF3-213ENST00000620529 1899 ntBASIC17.78■□□□□ 0.44
TRIM71Q2Q1W2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 RPS2P32-201ENST00000439199 892 ntBASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 TTTY23B-201ENST00000442790 549 ntBASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 AC022210.1-201ENST00000449856 793 ntBASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 RAB43P1-201ENST00000561790 589 ntBASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 MIR4321-201ENST00000592276 80 ntBASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 WFDC1-204ENST00000613603 549 ntBASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM71Q2Q1W2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 U82695.1-201ENST00000635752 1889 ntBASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 AC139713.2-201ENST00000641328 2723 ntBASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM71Q2Q1W2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 AC005622.1-201ENST00000636801 1703 ntBASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 CYP4F24P-201ENST00000586049 1580 ntBASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 FO393414.2-201ENST00000405153 598 ntBASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM71Q2Q1W2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms