Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.61■□□□□ 0.41
SMAD3P84022 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMAD3P84022 AL021920.2-201ENST00000624828 1351 ntBASIC17.61■□□□□ 0.41
SMAD3P84022 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD3P84022 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.61■□□□□ 0.41
SMAD3P84022 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SMAD3P84022 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD3P84022 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD3P84022 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD3P84022 CROCCP2-202ENST00000412962 2773 ntBASIC17.61■□□□□ 0.41
SMAD3P84022 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD3P84022 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD3P84022 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD3P84022 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.61■□□□□ 0.41
SMAD3P84022 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SMAD3P84022 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SMAD3P84022 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.6■□□□□ 0.41
SMAD3P84022 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SMAD3P84022 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SMAD3P84022 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD3P84022 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD3P84022 SLC25A24P2-201ENST00000415059 510 ntBASIC17.6■□□□□ 0.41
SMAD3P84022 ACTG1P3-201ENST00000431775 1114 ntBASIC17.6■□□□□ 0.41
SMAD3P84022 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.6■□□□□ 0.41
SMAD3P84022 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SMAD3P84022 TIMM17BP1-201ENST00000545713 516 ntBASIC17.6■□□□□ 0.41
SMAD3P84022 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD3P84022 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD3P84022 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.6■□□□□ 0.41
SMAD3P84022 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.6■□□□□ 0.41
SMAD3P84022 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.6■□□□□ 0.41
SMAD3P84022 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.6■□□□□ 0.41
SMAD3P84022 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.6■□□□□ 0.41
SMAD3P84022 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
SMAD3P84022 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD3P84022 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SMAD3P84022 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.59■□□□□ 0.41
SMAD3P84022 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.59■□□□□ 0.41
SMAD3P84022 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMAD3P84022 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.59■□□□□ 0.41
SMAD3P84022 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 AL162726.2-201ENST00000438986 1017 ntBASIC17.59■□□□□ 0.41
SMAD3P84022 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.59■□□□□ 0.41
SMAD3P84022 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.59■□□□□ 0.41
SMAD3P84022 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.59■□□□□ 0.41
SMAD3P84022 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.59■□□□□ 0.41
SMAD3P84022 MIR5189-201ENST00000577370 114 ntBASIC17.59■□□□□ 0.41
SMAD3P84022 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.59■□□□□ 0.41
SMAD3P84022 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMAD3P84022 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD3P84022 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD3P84022 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.58■□□□□ 0.41
SMAD3P84022 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD3P84022 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD3P84022 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
SMAD3P84022 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.58■□□□□ 0.41
SMAD3P84022 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD3P84022 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms