Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HTRA3P83110 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTRA3P83110 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HTRA3P83110 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
HTRA3P83110 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HTRA3P83110 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.7■□□□□ 0.58
HTRA3P83110 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HTRA3P83110 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HTRA3P83110 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTRA3P83110 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTRA3P83110 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTRA3P83110 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTRA3P83110 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTRA3P83110 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HTRA3P83110 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HTRA3P83110 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.7■□□□□ 0.58
HTRA3P83110 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HTRA3P83110 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.7■□□□□ 0.58
HTRA3P83110 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HTRA3P83110 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.7■□□□□ 0.58
HTRA3P83110 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.7■□□□□ 0.58
HTRA3P83110 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.7■□□□□ 0.58
HTRA3P83110 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.7■□□□□ 0.58
HTRA3P83110 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HTRA3P83110 REXO1L8P-201ENST00000604378 1897 ntBASIC18.7■□□□□ 0.58
HTRA3P83110 AC087045.2-201ENST00000606279 1003 ntBASIC18.7■□□□□ 0.58
HTRA3P83110 PLS3-210ENST00000626746 216 ntTSL 4 BASIC18.7■□□□□ 0.58
HTRA3P83110 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.7■□□□□ 0.58
HTRA3P83110 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTRA3P83110 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTRA3P83110 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HTRA3P83110 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HTRA3P83110 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.7■□□□□ 0.58
HTRA3P83110 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HTRA3P83110 AC025271.4-201ENST00000621477 1726 ntBASIC18.69■□□□□ 0.58
HTRA3P83110 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.69■□□□□ 0.58
HTRA3P83110 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.69■□□□□ 0.58
HTRA3P83110 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.69■□□□□ 0.58
HTRA3P83110 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 SERPINA13P-202ENST00000478994 924 ntBASIC18.69■□□□□ 0.58
HTRA3P83110 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.69■□□□□ 0.58
HTRA3P83110 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.69■□□□□ 0.58
HTRA3P83110 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.69■□□□□ 0.58
HTRA3P83110 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.69■□□□□ 0.58
HTRA3P83110 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
HTRA3P83110 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.69■□□□□ 0.58
HTRA3P83110 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTRA3P83110 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HTRA3P83110 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HTRA3P83110 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 AZGP1P1-201ENST00000411909 902 ntBASIC18.68■□□□□ 0.58
HTRA3P83110 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.68■□□□□ 0.58
HTRA3P83110 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.68■□□□□ 0.58
HTRA3P83110 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HTRA3P83110 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.68■□□□□ 0.58
HTRA3P83110 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.68■□□□□ 0.58
HTRA3P83110 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.68■□□□□ 0.58
HTRA3P83110 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.68■□□□□ 0.58
HTRA3P83110 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.68■□□□□ 0.58
HTRA3P83110 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HTRA3P83110 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HTRA3P83110 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTRA3P83110 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTRA3P83110 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.67■□□□□ 0.58
HTRA3P83110 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTRA3P83110 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTRA3P83110 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTRA3P83110 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTRA3P83110 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.67■□□□□ 0.58
HTRA3P83110 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTRA3P83110 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTRA3P83110 KRT18P64-201ENST00000434946 1219 ntBASIC18.67■□□□□ 0.58
HTRA3P83110 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HTRA3P83110 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.67■□□□□ 0.58
HTRA3P83110 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTRA3P83110 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HTRA3P83110 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms