Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 AL121894.2-201ENST00000602977 491 ntBASIC16.64■□□□□ 0.25
PRAMEP78395 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 AC020765.3-201ENST00000613051 740 ntBASIC16.64■□□□□ 0.25
PRAMEP78395 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.64■□□□□ 0.25
PRAMEP78395 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PRAMEP78395 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.64■□□□□ 0.25
PRAMEP78395 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PRAMEP78395 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.64■□□□□ 0.25
PRAMEP78395 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRAMEP78395 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PRAMEP78395 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEP78395 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 AC104109.2-201ENST00000602919 1418 ntBASIC16.63■□□□□ 0.25
PRAMEP78395 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEP78395 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PRAMEP78395 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEP78395 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEP78395 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEP78395 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEP78395 LINC01144-201ENST00000626198 1710 ntBASIC16.63■□□□□ 0.25
PRAMEP78395 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 HMGA1P7-201ENST00000406908 502 ntBASIC16.63■□□□□ 0.25
PRAMEP78395 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEP78395 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.63■□□□□ 0.25
PRAMEP78395 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEP78395 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEP78395 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 AC096734.2-201ENST00000562054 433 ntBASIC16.63■□□□□ 0.25
PRAMEP78395 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 AL031055.1-201ENST00000606362 631 ntBASIC16.63■□□□□ 0.25
PRAMEP78395 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.63■□□□□ 0.25
PRAMEP78395 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PRAMEP78395 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEP78395 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEP78395 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEP78395 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.63■□□□□ 0.25
PRAMEP78395 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEP78395 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEP78395 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 AC132872.4-202ENST00000622924 2756 ntBASIC16.62■□□□□ 0.25
PRAMEP78395 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEP78395 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEP78395 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEP78395 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEP78395 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 RNU1-129P-201ENST00000384064 167 ntBASIC16.62■□□□□ 0.25
PRAMEP78395 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEP78395 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEP78395 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEP78395 AC145285.3-201ENST00000564603 959 ntBASIC16.62■□□□□ 0.25
PRAMEP78395 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEP78395 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 U1.21-201ENST00000580816 167 ntBASIC16.62■□□□□ 0.25
PRAMEP78395 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 AC010507.1-201ENST00000633895 436 ntBASIC16.62■□□□□ 0.25
PRAMEP78395 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms