Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.52■□□□□ 0.55
TPM4P67936 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TPM4P67936 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TPM4P67936 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 MYO15B-237ENST00000642007 4893 ntBASIC18.51■□□□□ 0.55
TPM4P67936 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.51■□□□□ 0.55
TPM4P67936 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
TPM4P67936 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.51■□□□□ 0.55
TPM4P67936 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TPM4P67936 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 TSSC2-201ENST00000450217 709 ntBASIC18.51■□□□□ 0.55
TPM4P67936 TOB2P1-201ENST00000469761 992 ntBASIC18.51■□□□□ 0.55
TPM4P67936 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TPM4P67936 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TPM4P67936 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.51■□□□□ 0.55
TPM4P67936 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.51■□□□□ 0.55
TPM4P67936 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TPM4P67936 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TPM4P67936 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.5■□□□□ 0.55
TPM4P67936 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.5■□□□□ 0.55
TPM4P67936 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TPM4P67936 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM4P67936 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.5■□□□□ 0.55
TPM4P67936 DUX4L26-201ENST00000489078 1255 ntBASIC18.5■□□□□ 0.55
TPM4P67936 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM4P67936 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 LINC01023-201ENST00000606054 436 ntBASIC18.5■□□□□ 0.55
TPM4P67936 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.5■□□□□ 0.55
TPM4P67936 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM4P67936 AL121956.5-201ENST00000625261 221 ntBASIC18.5■□□□□ 0.55
TPM4P67936 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TPM4P67936 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM4P67936 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM4P67936 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.5■□□□□ 0.55
TPM4P67936 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TPM4P67936 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TPM4P67936 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 SBF1P1-201ENST00000444527 5631 ntBASIC18.49■□□□□ 0.55
TPM4P67936 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.49■□□□□ 0.55
TPM4P67936 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.49■□□□□ 0.55
TPM4P67936 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.49■□□□□ 0.55
TPM4P67936 LINC00265-3P-201ENST00000447588 903 ntBASIC18.49■□□□□ 0.55
TPM4P67936 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPM4P67936 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.49■□□□□ 0.55
TPM4P67936 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.49■□□□□ 0.55
TPM4P67936 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.49■□□□□ 0.55
TPM4P67936 MIR4492-201ENST00000581627 80 ntBASIC18.49■□□□□ 0.55
TPM4P67936 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.49■□□□□ 0.55
TPM4P67936 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TPM4P67936 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.49■□□□□ 0.55
TPM4P67936 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms