Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ACTBP60709 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.2□□□□□ -0.14
ACTBP60709 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 AC097376.2-205ENST00000610159 5334 ntBASIC14.2□□□□□ -0.14
ACTBP60709 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
ACTBP60709 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 DRAXINP1-201ENST00000437611 948 ntBASIC14.2□□□□□ -0.14
ACTBP60709 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.2□□□□□ -0.14
ACTBP60709 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 Z69720.1-201ENST00000601483 472 ntBASIC14.2□□□□□ -0.14
ACTBP60709 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.2□□□□□ -0.14
ACTBP60709 AC073592.5-201ENST00000624854 528 ntBASIC14.2□□□□□ -0.14
ACTBP60709 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.2□□□□□ -0.14
ACTBP60709 AC013268.4-201ENST00000637413 2228 ntBASIC14.2□□□□□ -0.14
ACTBP60709 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ACTBP60709 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 CDC14C-201ENST00000428251 1719 ntBASIC14.2□□□□□ -0.14
ACTBP60709 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ACTBP60709 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.2□□□□□ -0.14
ACTBP60709 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ACTBP60709 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.2□□□□□ -0.14
ACTBP60709 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.19□□□□□ -0.14
ACTBP60709 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ACTBP60709 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.19□□□□□ -0.14
ACTBP60709 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.19□□□□□ -0.14
ACTBP60709 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
ACTBP60709 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 FAM45BP-202ENST00000592932 1624 ntBASIC14.19□□□□□ -0.14
ACTBP60709 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
ACTBP60709 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.19□□□□□ -0.14
ACTBP60709 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ACTBP60709 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.19□□□□□ -0.14
ACTBP60709 AP002383.4-201ENST00000442518 975 ntBASIC14.19□□□□□ -0.14
ACTBP60709 LINC00265-3P-201ENST00000447588 903 ntBASIC14.19□□□□□ -0.14
ACTBP60709 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.19□□□□□ -0.14
ACTBP60709 TOB2P1-201ENST00000469761 992 ntBASIC14.19□□□□□ -0.14
ACTBP60709 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.19□□□□□ -0.14
ACTBP60709 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.19□□□□□ -0.14
ACTBP60709 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.19□□□□□ -0.14
ACTBP60709 TPSP2-201ENST00000561760 610 ntBASIC14.19□□□□□ -0.14
ACTBP60709 AC005336.2-201ENST00000593183 939 ntBASIC14.19□□□□□ -0.14
ACTBP60709 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.19□□□□□ -0.14
ACTBP60709 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 AD001527.2-201ENST00000622994 785 ntBASIC14.19□□□□□ -0.14
ACTBP60709 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ACTBP60709 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.19□□□□□ -0.14
ACTBP60709 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ACTBP60709 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms