Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.25■□□□□ 0.67
RHBDL3P58872 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.25■□□□□ 0.67
RHBDL3P58872 AL691432.1-201ENST00000596308 1422 ntBASIC19.25■□□□□ 0.67
RHBDL3P58872 CU639417.3-201ENST00000624240 1404 ntBASIC19.25■□□□□ 0.67
RHBDL3P58872 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.25■□□□□ 0.67
RHBDL3P58872 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RHBDL3P58872 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RHBDL3P58872 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.24■□□□□ 0.67
RHBDL3P58872 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.24■□□□□ 0.67
RHBDL3P58872 AC023310.3-201ENST00000557027 670 ntBASIC19.24■□□□□ 0.67
RHBDL3P58872 AC100756.1-201ENST00000562736 682 ntBASIC19.24■□□□□ 0.67
RHBDL3P58872 AC138749.3-201ENST00000567691 622 ntBASIC19.24■□□□□ 0.67
RHBDL3P58872 AC092337.1-201ENST00000568699 1129 ntBASIC19.24■□□□□ 0.67
RHBDL3P58872 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.24■□□□□ 0.67
RHBDL3P58872 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.24■□□□□ 0.67
RHBDL3P58872 AC116165.1-201ENST00000611806 668 ntBASIC19.24■□□□□ 0.67
RHBDL3P58872 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.24■□□□□ 0.67
RHBDL3P58872 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RHBDL3P58872 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.24■□□□□ 0.67
RHBDL3P58872 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RHBDL3P58872 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RHBDL3P58872 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDL3P58872 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDL3P58872 ALOX12P2-203ENST00000570921 1945 ntBASIC19.23■□□□□ 0.67
RHBDL3P58872 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RHBDL3P58872 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RHBDL3P58872 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.23■□□□□ 0.67
RHBDL3P58872 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDL3P58872 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDL3P58872 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.23■□□□□ 0.67
RHBDL3P58872 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.23■□□□□ 0.67
RHBDL3P58872 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RHBDL3P58872 EEF1DP4-201ENST00000446006 880 ntBASIC19.23■□□□□ 0.67
RHBDL3P58872 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDL3P58872 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.23■□□□□ 0.67
RHBDL3P58872 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.23■□□□□ 0.67
RHBDL3P58872 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.23■□□□□ 0.67
RHBDL3P58872 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RHBDL3P58872 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDL3P58872 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDL3P58872 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.23■□□□□ 0.67
RHBDL3P58872 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RHBDL3P58872 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDL3P58872 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.23■□□□□ 0.67
RHBDL3P58872 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDL3P58872 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 REXO1L8P-201ENST00000604378 1897 ntBASIC19.22■□□□□ 0.67
RHBDL3P58872 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RHBDL3P58872 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RHBDL3P58872 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.22■□□□□ 0.67
RHBDL3P58872 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 GK-202ENST00000378941 458 ntTSL 3 BASIC19.22■□□□□ 0.67
RHBDL3P58872 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.22■□□□□ 0.67
RHBDL3P58872 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.22■□□□□ 0.67
RHBDL3P58872 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.22■□□□□ 0.67
RHBDL3P58872 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.22■□□□□ 0.67
RHBDL3P58872 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 AC008494.3-201ENST00000606615 944 ntBASIC19.22■□□□□ 0.67
RHBDL3P58872 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.22■□□□□ 0.67
RHBDL3P58872 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
RHBDL3P58872 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.22■□□□□ 0.67
RHBDL3P58872 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RHBDL3P58872 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.22■□□□□ 0.67
RHBDL3P58872 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RHBDL3P58872 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 AC138969.3-201ENST00000546612 1459 ntBASIC19.22■□□□□ 0.67
RHBDL3P58872 AC138932.2-201ENST00000548268 1459 ntBASIC19.22■□□□□ 0.67
RHBDL3P58872 AC126755.4-201ENST00000549796 1459 ntBASIC19.22■□□□□ 0.67
RHBDL3P58872 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDL3P58872 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms