Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PER3P56645 KRT18P32-201ENST00000424695 1287 ntBASIC15.3■□□□□ 0.04
PER3P56645 AL671277.1-201ENST00000429656 993 ntBASIC15.3■□□□□ 0.04
PER3P56645 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.3■□□□□ 0.04
PER3P56645 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.3■□□□□ 0.04
PER3P56645 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PER3P56645 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.3■□□□□ 0.04
PER3P56645 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.3■□□□□ 0.04
PER3P56645 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.3■□□□□ 0.04
PER3P56645 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.3■□□□□ 0.04
PER3P56645 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.3■□□□□ 0.04
PER3P56645 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PER3P56645 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PER3P56645 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.29■□□□□ 0.04
PER3P56645 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PER3P56645 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 LINC00304-203ENST00000565008 1864 ntBASIC15.29■□□□□ 0.04
PER3P56645 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PER3P56645 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.29■□□□□ 0.04
PER3P56645 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.29■□□□□ 0.04
PER3P56645 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PER3P56645 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.29■□□□□ 0.04
PER3P56645 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.29■□□□□ 0.04
PER3P56645 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.29■□□□□ 0.04
PER3P56645 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.29■□□□□ 0.04
PER3P56645 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 AL355306.1-201ENST00000415580 579 ntBASIC15.29■□□□□ 0.04
PER3P56645 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.29■□□□□ 0.04
PER3P56645 AC055876.3-201ENST00000431496 288 ntBASIC15.29■□□□□ 0.04
PER3P56645 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.29■□□□□ 0.04
PER3P56645 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.29■□□□□ 0.04
PER3P56645 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.29■□□□□ 0.04
PER3P56645 DUX4L27-201ENST00000554796 1261 ntBASIC15.29■□□□□ 0.04
PER3P56645 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.29■□□□□ 0.04
PER3P56645 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.29■□□□□ 0.04
PER3P56645 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.29■□□□□ 0.04
PER3P56645 AC027307.3-201ENST00000594262 1100 ntBASIC15.29■□□□□ 0.04
PER3P56645 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PER3P56645 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.29■□□□□ 0.04
PER3P56645 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
PER3P56645 AC138649.4-201ENST00000612222 287 ntBASIC15.29■□□□□ 0.04
PER3P56645 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.29■□□□□ 0.04
PER3P56645 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.29■□□□□ 0.04
PER3P56645 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.29■□□□□ 0.04
PER3P56645 AL358472.5-202ENST00000641448 1267 ntBASIC15.29■□□□□ 0.04
PER3P56645 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.29■□□□□ 0.04
PER3P56645 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.29■□□□□ 0.04
PER3P56645 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.29■□□□□ 0.04
PER3P56645 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PER3P56645 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PER3P56645 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms