Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN5P54829 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PTPN5P54829 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN5P54829 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN5P54829 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN5P54829 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.96■□□□□ 0.3
PTPN5P54829 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN5P54829 KRT8P49-201ENST00000604166 1432 ntBASIC16.96■□□□□ 0.3
PTPN5P54829 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PTPN5P54829 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN5P54829 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN5P54829 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PTPN5P54829 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
PTPN5P54829 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTPN5P54829 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTPN5P54829 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN5P54829 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN5P54829 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN5P54829 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN5P54829 GNAQP1-201ENST00000444815 1067 ntBASIC16.95■□□□□ 0.3
PTPN5P54829 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTPN5P54829 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN5P54829 AC135586.1-201ENST00000539323 574 ntBASIC16.95■□□□□ 0.3
PTPN5P54829 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN5P54829 AC244093.1-201ENST00000610837 814 ntBASIC16.95■□□□□ 0.3
PTPN5P54829 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.95■□□□□ 0.3
PTPN5P54829 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PTPN5P54829 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN5P54829 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTPN5P54829 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTPN5P54829 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN5P54829 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN5P54829 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN5P54829 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN5P54829 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN5P54829 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN5P54829 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 TOP3BP1-201ENST00000420768 1380 ntBASIC16.94■□□□□ 0.3
PTPN5P54829 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTPN5P54829 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTPN5P54829 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN5P54829 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTPN5P54829 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PTPN5P54829 AC104989.1-201ENST00000519711 778 ntBASIC16.94■□□□□ 0.3
PTPN5P54829 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.94■□□□□ 0.3
PTPN5P54829 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.94■□□□□ 0.3
PTPN5P54829 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN5P54829 AC107918.2-201ENST00000530817 355 ntBASIC16.94■□□□□ 0.3
PTPN5P54829 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.94■□□□□ 0.3
PTPN5P54829 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN5P54829 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 MIR6727-201ENST00000620702 65 ntBASIC16.94■□□□□ 0.3
PTPN5P54829 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN5P54829 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN5P54829 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN5P54829 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN5P54829 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PTPN5P54829 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.94■□□□□ 0.3
PTPN5P54829 AC060834.1-201ENST00000443027 2032 ntBASIC16.94■□□□□ 0.3
PTPN5P54829 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN5P54829 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN5P54829 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN5P54829 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN5P54829 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN5P54829 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN5P54829 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN5P54829 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN5P54829 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms