Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE1AP54750 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE1AP54750 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE1AP54750 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE1AP54750 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE1AP54750 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 CDC14C-201ENST00000428251 1719 ntBASIC20.02■□□□□ 0.8
PDE1AP54750 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDE1AP54750 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDE1AP54750 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDE1AP54750 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 YBX2P1-201ENST00000394192 760 ntBASIC20.02■□□□□ 0.8
PDE1AP54750 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDE1AP54750 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 AC243562.1-201ENST00000560672 389 ntBASIC20.02■□□□□ 0.8
PDE1AP54750 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.02■□□□□ 0.8
PDE1AP54750 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.02■□□□□ 0.8
PDE1AP54750 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 C20orf181-201ENST00000623918 480 ntBASIC20.02■□□□□ 0.8
PDE1AP54750 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.02■□□□□ 0.8
PDE1AP54750 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE1AP54750 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE1AP54750 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE1AP54750 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE1AP54750 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE1AP54750 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.02■□□□□ 0.79
PDE1AP54750 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.01■□□□□ 0.79
PDE1AP54750 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.01■□□□□ 0.79
PDE1AP54750 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.01■□□□□ 0.79
PDE1AP54750 ALG1L5P-201ENST00000482043 771 ntBASIC20.01■□□□□ 0.79
PDE1AP54750 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.01■□□□□ 0.79
PDE1AP54750 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.01■□□□□ 0.79
PDE1AP54750 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.01■□□□□ 0.79
PDE1AP54750 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 AC112504.1-201ENST00000623415 1841 ntBASIC20.01■□□□□ 0.79
PDE1AP54750 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 AC069224.1-201ENST00000566372 1715 ntBASIC20.01■□□□□ 0.79
PDE1AP54750 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PDE1AP54750 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PDE1AP54750 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PDE1AP54750 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE1AP54750 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20■□□□□ 0.79
PDE1AP54750 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PDE1AP54750 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20■□□□□ 0.79
PDE1AP54750 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 MIR648-201ENST00000385046 94 ntBASIC20■□□□□ 0.79
PDE1AP54750 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20■□□□□ 0.79
PDE1AP54750 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 KRT8P48-201ENST00000515599 1220 ntBASIC20■□□□□ 0.79
PDE1AP54750 MTDHP5-201ENST00000598980 586 ntBASIC20■□□□□ 0.79
PDE1AP54750 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20■□□□□ 0.79
PDE1AP54750 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDE1AP54750 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PDE1AP54750 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PDE1AP54750 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PDE1AP54750 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms