Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.09■□□□□ 0.49
PMS1P54277 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.09■□□□□ 0.49
PMS1P54277 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PMS1P54277 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PMS1P54277 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.09■□□□□ 0.49
PMS1P54277 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PMS1P54277 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.08■□□□□ 0.49
PMS1P54277 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.08■□□□□ 0.49
PMS1P54277 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PMS1P54277 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PMS1P54277 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.08■□□□□ 0.49
PMS1P54277 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PMS1P54277 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.08■□□□□ 0.49
PMS1P54277 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PMS1P54277 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PMS1P54277 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PMS1P54277 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.08■□□□□ 0.48
PMS1P54277 AC092474.2-201ENST00000424288 719 ntBASIC18.08■□□□□ 0.48
PMS1P54277 FDX1P1-201ENST00000449115 551 ntBASIC18.08■□□□□ 0.48
PMS1P54277 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
PMS1P54277 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.08■□□□□ 0.48
PMS1P54277 AC109635.5-201ENST00000533593 962 ntBASIC18.08■□□□□ 0.48
PMS1P54277 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PMS1P54277 AC023141.13-201ENST00000604991 943 ntBASIC18.08■□□□□ 0.48
PMS1P54277 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.08■□□□□ 0.48
PMS1P54277 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PMS1P54277 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.08■□□□□ 0.48
PMS1P54277 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PMS1P54277 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.08■□□□□ 0.48
PMS1P54277 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PMS1P54277 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PMS1P54277 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.08■□□□□ 0.48
PMS1P54277 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PMS1P54277 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
PMS1P54277 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PMS1P54277 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.07■□□□□ 0.48
PMS1P54277 IL9RP2-201ENST00000423948 1312 ntBASIC18.07■□□□□ 0.48
PMS1P54277 BCAR1-209ENST00000546196 1340 ntBASIC18.07■□□□□ 0.48
PMS1P54277 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PMS1P54277 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.07■□□□□ 0.48
PMS1P54277 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PMS1P54277 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.07■□□□□ 0.48
PMS1P54277 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PMS1P54277 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.07■□□□□ 0.48
PMS1P54277 AC093724.1-201ENST00000448659 1027 ntBASIC18.07■□□□□ 0.48
PMS1P54277 RPL13AP23-201ENST00000480739 586 ntBASIC18.07■□□□□ 0.48
PMS1P54277 SLC25A1P1-201ENST00000528351 927 ntBASIC18.07■□□□□ 0.48
PMS1P54277 KRT19P2-202ENST00000557173 1012 ntBASIC18.07■□□□□ 0.48
PMS1P54277 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.07■□□□□ 0.48
PMS1P54277 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.07■□□□□ 0.48
PMS1P54277 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.07■□□□□ 0.48
PMS1P54277 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.07■□□□□ 0.48
PMS1P54277 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
PMS1P54277 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMS1P54277 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.07■□□□□ 0.48
PMS1P54277 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
PMS1P54277 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 AC016027.1-202ENST00000607927 1699 ntBASIC18.06■□□□□ 0.48
PMS1P54277 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.06■□□□□ 0.48
PMS1P54277 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.06■□□□□ 0.48
PMS1P54277 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PMS1P54277 AC140658.5-201ENST00000438532 169 ntBASIC18.06■□□□□ 0.48
PMS1P54277 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.06■□□□□ 0.48
PMS1P54277 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.06■□□□□ 0.48
PMS1P54277 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.06■□□□□ 0.48
PMS1P54277 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.06■□□□□ 0.48
PMS1P54277 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.06■□□□□ 0.48
PMS1P54277 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.06■□□□□ 0.48
PMS1P54277 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.06■□□□□ 0.48
PMS1P54277 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PMS1P54277 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms