Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 PRORSD1P-202ENST00000563365 2154 ntBASIC17.2■□□□□ 0.34
CLCN4P51793 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLCN4P51793 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN4P51793 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN4P51793 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN4P51793 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
CLCN4P51793 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCN4P51793 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLCN4P51793 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN4P51793 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN4P51793 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN4P51793 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN4P51793 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN4P51793 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLCN4P51793 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLCN4P51793 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLCN4P51793 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN4P51793 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCN4P51793 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.19■□□□□ 0.34
CLCN4P51793 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN4P51793 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCN4P51793 AC004461.2-201ENST00000629517 803 ntBASIC17.19■□□□□ 0.34
CLCN4P51793 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.19■□□□□ 0.34
CLCN4P51793 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 GPAA1P2-202ENST00000606848 1787 ntBASIC17.19■□□□□ 0.34
CLCN4P51793 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN4P51793 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLCN4P51793 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCN4P51793 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCN4P51793 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN4P51793 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
CLCN4P51793 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN4P51793 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CLCN4P51793 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 AC079776.1-201ENST00000401540 1152 ntBASIC17.18■□□□□ 0.34
CLCN4P51793 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCN4P51793 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN4P51793 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CLCN4P51793 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
CLCN4P51793 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCN4P51793 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLCN4P51793 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCN4P51793 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLCN4P51793 AL031731.1-201ENST00000642131 2094 ntBASIC17.17■□□□□ 0.34
CLCN4P51793 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLCN4P51793 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLCN4P51793 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLCN4P51793 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLCN4P51793 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLCN4P51793 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCN4P51793 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCN4P51793 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms