Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CDK7P50613 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDK7P50613 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDK7P50613 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.07■□□□□ 0.48
CDK7P50613 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.07■□□□□ 0.48
CDK7P50613 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.07■□□□□ 0.48
CDK7P50613 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.07■□□□□ 0.48
CDK7P50613 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.07■□□□□ 0.48
CDK7P50613 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.07■□□□□ 0.48
CDK7P50613 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.07■□□□□ 0.48
CDK7P50613 AL606495.2-201ENST00000605867 535 ntBASIC18.07■□□□□ 0.48
CDK7P50613 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDK7P50613 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.07■□□□□ 0.48
CDK7P50613 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CDK7P50613 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDK7P50613 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDK7P50613 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CDK7P50613 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 TMEM14DP-201ENST00000422205 345 ntBASIC18.06■□□□□ 0.48
CDK7P50613 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.06■□□□□ 0.48
CDK7P50613 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.06■□□□□ 0.48
CDK7P50613 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.06■□□□□ 0.48
CDK7P50613 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.06■□□□□ 0.48
CDK7P50613 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.06■□□□□ 0.48
CDK7P50613 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
CDK7P50613 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.06■□□□□ 0.48
CDK7P50613 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.06■□□□□ 0.48
CDK7P50613 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.06■□□□□ 0.48
CDK7P50613 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDK7P50613 AC026979.3-201ENST00000607315 403 ntBASIC18.06■□□□□ 0.48
CDK7P50613 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK7P50613 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 AL033527.4-201ENST00000641026 673 ntBASIC18.06■□□□□ 0.48
CDK7P50613 AL109936.8-201ENST00000641772 604 ntBASIC18.06■□□□□ 0.48
CDK7P50613 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDK7P50613 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK7P50613 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.06■□□□□ 0.48
CDK7P50613 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDK7P50613 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDK7P50613 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDK7P50613 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.05■□□□□ 0.48
CDK7P50613 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK7P50613 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.05■□□□□ 0.48
CDK7P50613 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK7P50613 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.05■□□□□ 0.48
CDK7P50613 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK7P50613 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK7P50613 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.05■□□□□ 0.48
CDK7P50613 AP005482.1-201ENST00000563722 1273 ntBASIC18.05■□□□□ 0.48
CDK7P50613 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.05■□□□□ 0.48
CDK7P50613 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.05■□□□□ 0.48
CDK7P50613 AC093726.1-201ENST00000608064 963 ntBASIC18.05■□□□□ 0.48
CDK7P50613 MIR6069-201ENST00000620069 79 ntBASIC18.05■□□□□ 0.48
CDK7P50613 COX11-210ENST00000639671 696 ntBASIC18.05■□□□□ 0.48
CDK7P50613 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CDK7P50613 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDK7P50613 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms